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STEMORIA scientific instrument
Parse a single V2000 connection table into atom coordinates and explicit bond records, then inspect and measure from the same STEMORIA-owned state.
01
Manipulate
02
Measure
03
Interpret
Scientific viewport
Spatial reasoning engine
Parse a single V2000 connection table into STEMORIA atom coordinates and explicit bond records, then inspect and measure from that state while keeping WebGL rendering optional.
STEMORIA parsed CTAB
Measurement
Select atoms
Select two parsed atoms. No physical unit is assumed for V2000 coordinates in this experience.
Parsed CTAB state
Paste a valid single V2000 record to inspect parsed state.
Bond records
No parsed bond table yet.
Format source
MDL CTfile format documentation (archived via Daylight)
CTFile Formats — V2000 Connection Table. The parser follows the V2000 counts → atom block → bond block organization.
Scientific boundary
Only V2000 atom coordinates, atom symbol entries, and explicit bond endpoint/type fields are promoted into STEMORIA state here.
Charges, isotopes, stereochemistry, property records, query features, Sgroups, and V3000 semantics are outside this v1 parser unless added explicitly later.